Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.45□□□□□ -0.1
SHC1P29353 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SHC1P29353 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.45□□□□□ -0.1
SHC1P29353 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
SHC1P29353 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.45□□□□□ -0.1
SHC1P29353 AC243562.2-201ENST00000561247 970 ntBASIC14.45□□□□□ -0.1
SHC1P29353 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.45□□□□□ -0.1
SHC1P29353 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
SHC1P29353 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.45□□□□□ -0.1
SHC1P29353 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
SHC1P29353 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.45□□□□□ -0.1
SHC1P29353 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
SHC1P29353 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
SHC1P29353 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
SHC1P29353 AC018892.3-201ENST00000623986 2499 ntBASIC14.44□□□□□ -0.1
SHC1P29353 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.44□□□□□ -0.1
SHC1P29353 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 AC004987.2-201ENST00000395959 1148 ntBASIC14.44□□□□□ -0.1
SHC1P29353 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 AC055876.3-201ENST00000431496 288 ntBASIC14.44□□□□□ -0.1
SHC1P29353 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.44□□□□□ -0.1
SHC1P29353 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.44□□□□□ -0.1
SHC1P29353 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 IGHV3-42-201ENST00000520410 361 ntBASIC14.44□□□□□ -0.1
SHC1P29353 AC027369.6-201ENST00000525520 931 ntBASIC14.44□□□□□ -0.1
SHC1P29353 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.44□□□□□ -0.1
SHC1P29353 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.44□□□□□ -0.1
SHC1P29353 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.44□□□□□ -0.1
SHC1P29353 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.44□□□□□ -0.1
SHC1P29353 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.44□□□□□ -0.1
SHC1P29353 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 AL158211.3-201ENST00000607385 239 ntBASIC14.44□□□□□ -0.1
SHC1P29353 AC138649.4-201ENST00000612222 287 ntBASIC14.44□□□□□ -0.1
SHC1P29353 TEX28P1-201ENST00000613479 1221 ntBASIC14.44□□□□□ -0.1
SHC1P29353 TEX28P2-201ENST00000617764 1221 ntBASIC14.44□□□□□ -0.1
SHC1P29353 AL390754.1-201ENST00000619088 582 ntBASIC14.44□□□□□ -0.1
SHC1P29353 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SHC1P29353 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.44□□□□□ -0.1
SHC1P29353 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
SHC1P29353 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
SHC1P29353 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHC1P29353 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SHC1P29353 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SHC1P29353 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.43□□□□□ -0.1
SHC1P29353 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SHC1P29353 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.43□□□□□ -0.1
SHC1P29353 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 SPDYE17-201ENST00000412399 783 ntBASIC14.43□□□□□ -0.1
SHC1P29353 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SHC1P29353 HLA-V-204ENST00000476601 1289 ntBASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms