Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CD40P25942 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC13.51□□□□□ -0.25
CD40P25942 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.51□□□□□ -0.25
CD40P25942 AC124283.3-201ENST00000570869 594 ntBASIC13.51□□□□□ -0.25
CD40P25942 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.51□□□□□ -0.25
CD40P25942 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.51□□□□□ -0.25
CD40P25942 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.51□□□□□ -0.25
CD40P25942 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CD40P25942 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD40P25942 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.5□□□□□ -0.25
CD40P25942 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 AC010491.1-201ENST00000563101 2797 ntBASIC13.5□□□□□ -0.25
CD40P25942 AC099398.1-201ENST00000567919 2776 ntBASIC13.5□□□□□ -0.25
CD40P25942 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CD40P25942 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC13.5□□□□□ -0.25
CD40P25942 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CD40P25942 ARSEP1-201ENST00000420443 635 ntBASIC13.5□□□□□ -0.25
CD40P25942 TMEM14DP-201ENST00000422205 345 ntBASIC13.5□□□□□ -0.25
CD40P25942 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.5□□□□□ -0.25
CD40P25942 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC13.5□□□□□ -0.25
CD40P25942 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.5□□□□□ -0.25
CD40P25942 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.5□□□□□ -0.25
CD40P25942 KRT17P8-201ENST00000540749 863 ntBASIC13.5□□□□□ -0.25
CD40P25942 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CD40P25942 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 AC008735.3-201ENST00000596646 500 ntBASIC13.5□□□□□ -0.25
CD40P25942 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.5□□□□□ -0.25
CD40P25942 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 AL513523.2-202ENST00000427283 2040 ntBASIC13.5□□□□□ -0.25
CD40P25942 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CD40P25942 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CD40P25942 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD40P25942 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
CD40P25942 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CD40P25942 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC13.49□□□□□ -0.25
CD40P25942 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC13.49□□□□□ -0.25
CD40P25942 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 MIR600HG-201ENST00000449175 5984 ntBASIC13.49□□□□□ -0.25
CD40P25942 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.49□□□□□ -0.25
CD40P25942 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CD40P25942 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.49□□□□□ -0.25
CD40P25942 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 ATP5G2P4-201ENST00000442175 420 ntBASIC13.49□□□□□ -0.25
CD40P25942 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.49□□□□□ -0.25
CD40P25942 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 IGHV3-71-201ENST00000523324 359 ntBASIC13.49□□□□□ -0.25
CD40P25942 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.49□□□□□ -0.25
CD40P25942 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.49□□□□□ -0.25
CD40P25942 HILS1-202ENST00000545329 423 ntBASIC13.49□□□□□ -0.25
CD40P25942 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.49□□□□□ -0.25
CD40P25942 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.49□□□□□ -0.25
CD40P25942 RAB43P1-201ENST00000561790 589 ntBASIC13.49□□□□□ -0.25
CD40P25942 AL359881.2-201ENST00000602973 570 ntBASIC13.49□□□□□ -0.25
CD40P25942 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.49□□□□□ -0.25
CD40P25942 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.49□□□□□ -0.25
CD40P25942 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CD40P25942 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms