Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.84□□□□□ -0.19
ATF1P18846 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.84□□□□□ -0.19
ATF1P18846 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 AC024267.1-201ENST00000582320 895 ntBASIC13.84□□□□□ -0.19
ATF1P18846 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 OR2I1P-210ENST00000642037 4691 ntBASIC13.84□□□□□ -0.19
ATF1P18846 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
ATF1P18846 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ATF1P18846 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.84□□□□□ -0.19
ATF1P18846 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ATF1P18846 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ATF1P18846 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ATF1P18846 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.83□□□□□ -0.19
ATF1P18846 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.83□□□□□ -0.19
ATF1P18846 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
ATF1P18846 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
ATF1P18846 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.83□□□□□ -0.19
ATF1P18846 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.83□□□□□ -0.2
ATF1P18846 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.83□□□□□ -0.2
ATF1P18846 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
ATF1P18846 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.83□□□□□ -0.2
ATF1P18846 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC13.83□□□□□ -0.2
ATF1P18846 RARRES2P8-201ENST00000566335 367 ntBASIC13.83□□□□□ -0.2
ATF1P18846 AL138918.1-201ENST00000568306 659 ntBASIC13.83□□□□□ -0.2
ATF1P18846 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.83□□□□□ -0.2
ATF1P18846 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.83□□□□□ -0.2
ATF1P18846 MIR4313-201ENST00000580760 101 ntBASIC13.83□□□□□ -0.2
ATF1P18846 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.83□□□□□ -0.2
ATF1P18846 SPTSSB-204ENST00000617024 1292 ntBASIC13.83□□□□□ -0.2
ATF1P18846 AL513190.1-201ENST00000621254 727 ntBASIC13.83□□□□□ -0.2
ATF1P18846 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.83□□□□□ -0.2
ATF1P18846 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 AC117489.1-201ENST00000625169 3217 ntBASIC13.83□□□□□ -0.2
ATF1P18846 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 AC005840.4-201ENST00000541242 2494 ntBASIC13.83□□□□□ -0.2
ATF1P18846 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.83□□□□□ -0.2
ATF1P18846 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ATF1P18846 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ATF1P18846 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
ATF1P18846 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ATF1P18846 AC140479.7-201ENST00000636301 2332 ntBASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms