Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.49■□□□□ 0.23
PDGFRAP16234 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 TSPY16P-201ENST00000449843 468 ntBASIC16.49■□□□□ 0.23
PDGFRAP16234 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFRAP16234 MIR3197-201ENST00000582241 73 ntBASIC16.49■□□□□ 0.23
PDGFRAP16234 AC022144.1-201ENST00000602255 1580 ntBASIC16.49■□□□□ 0.23
PDGFRAP16234 AL844908.2-201ENST00000609461 460 ntBASIC16.49■□□□□ 0.23
PDGFRAP16234 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.49■□□□□ 0.23
PDGFRAP16234 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.49■□□□□ 0.23
PDGFRAP16234 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PDGFRAP16234 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.49■□□□□ 0.23
PDGFRAP16234 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PDGFRAP16234 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PDGFRAP16234 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 MRPS18AP1-201ENST00000414458 589 ntBASIC16.48■□□□□ 0.23
PDGFRAP16234 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 AC044860.1-202ENST00000559481 777 ntBASIC16.48■□□□□ 0.23
PDGFRAP16234 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.48■□□□□ 0.23
PDGFRAP16234 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.48■□□□□ 0.23
PDGFRAP16234 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDGFRAP16234 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.48■□□□□ 0.23
PDGFRAP16234 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.47■□□□□ 0.23
PDGFRAP16234 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 MIR661-201ENST00000384842 89 ntBASIC16.47■□□□□ 0.23
PDGFRAP16234 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDGFRAP16234 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.47■□□□□ 0.23
PDGFRAP16234 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms