Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC12.3□□□□□ -0.44
CD28P10747 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.3□□□□□ -0.44
CD28P10747 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.3□□□□□ -0.44
CD28P10747 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CD28P10747 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 AL359711.2-201ENST00000563105 872 ntBASIC12.3□□□□□ -0.44
CD28P10747 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 MIR4259-201ENST00000584466 101 ntBASIC12.3□□□□□ -0.44
CD28P10747 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 AL450472.2-201ENST00000603663 1156 ntBASIC12.3□□□□□ -0.44
CD28P10747 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.3□□□□□ -0.44
CD28P10747 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
CD28P10747 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CD28P10747 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
CD28P10747 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CD28P10747 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC12.29□□□□□ -0.44
CD28P10747 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 MGST3-203ENST00000367885 680 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.29□□□□□ -0.44
CD28P10747 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.29□□□□□ -0.44
CD28P10747 AL442647.2-201ENST00000429864 857 ntBASIC12.29□□□□□ -0.44
CD28P10747 AL162726.2-201ENST00000438986 1017 ntBASIC12.29□□□□□ -0.44
CD28P10747 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC12.29□□□□□ -0.44
CD28P10747 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.29□□□□□ -0.44
CD28P10747 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CD28P10747 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC12.29□□□□□ -0.44
CD28P10747 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.29□□□□□ -0.44
CD28P10747 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 SNX29P1-201ENST00000548357 1007 ntBASIC12.29□□□□□ -0.44
CD28P10747 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.29□□□□□ -0.44
CD28P10747 BTNL10-201ENST00000595971 695 ntBASIC12.29□□□□□ -0.44
CD28P10747 AC133552.6-201ENST00000613406 534 ntBASIC12.29□□□□□ -0.44
CD28P10747 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CD28P10747 MIR6775-201ENST00000617557 69 ntBASIC12.29□□□□□ -0.44
CD28P10747 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.29□□□□□ -0.44
CD28P10747 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CD28P10747 AC008741.2-201ENST00000612792 3115 ntBASIC12.29□□□□□ -0.44
CD28P10747 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.29□□□□□ -0.44
CD28P10747 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CD28P10747 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CD28P10747 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms