Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.18■□□□□ 0.5
CALM3P0DP25 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
CALM3P0DP25 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.18■□□□□ 0.5
CALM3P0DP25 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.18■□□□□ 0.5
CALM3P0DP25 AMT-224ENST00000635808 1610 ntTSL 5 BASIC18.18■□□□□ 0.5
CALM3P0DP25 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALM3P0DP25 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALM3P0DP25 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALM3P0DP25 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.18■□□□□ 0.5
CALM3P0DP25 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC18.18■□□□□ 0.5
CALM3P0DP25 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.18■□□□□ 0.5
CALM3P0DP25 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALM3P0DP25 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CALM3P0DP25 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALM3P0DP25 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CALM3P0DP25 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CALM3P0DP25 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.17■□□□□ 0.5
CALM3P0DP25 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 AC132872.4-202ENST00000622924 2756 ntBASIC18.17■□□□□ 0.5
CALM3P0DP25 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CALM3P0DP25 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.17■□□□□ 0.5
CALM3P0DP25 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 AC104596.2-201ENST00000512793 793 ntBASIC18.17■□□□□ 0.5
CALM3P0DP25 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.17■□□□□ 0.5
CALM3P0DP25 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 AC093726.1-201ENST00000608064 963 ntBASIC18.17■□□□□ 0.5
CALM3P0DP25 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 AC022532.1-201ENST00000624563 1728 ntBASIC18.17■□□□□ 0.5
CALM3P0DP25 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
CALM3P0DP25 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CALM3P0DP25 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.17■□□□□ 0.5
CALM3P0DP25 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CALM3P0DP25 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.16■□□□□ 0.5
CALM3P0DP25 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 AC136621.1-201ENST00000624017 2304 ntBASIC18.16■□□□□ 0.5
CALM3P0DP25 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.16■□□□□ 0.5
CALM3P0DP25 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.16■□□□□ 0.5
CALM3P0DP25 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC18.16■□□□□ 0.5
CALM3P0DP25 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.16■□□□□ 0.5
CALM3P0DP25 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.16■□□□□ 0.5
CALM3P0DP25 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 MIR3197-201ENST00000582241 73 ntBASIC18.16■□□□□ 0.5
CALM3P0DP25 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC18.16■□□□□ 0.5
CALM3P0DP25 AL645728.2-202ENST00000641679 227 ntBASIC18.16■□□□□ 0.5
CALM3P0DP25 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC18.16■□□□□ 0.5
CALM3P0DP25 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CALM3P0DP25 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC18.16■□□□□ 0.5
CALM3P0DP25 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.16■□□□□ 0.5
CALM3P0DP25 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CALM3P0DP25 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALM3P0DP25 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CALM3P0DP25 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC18.15■□□□□ 0.5
CALM3P0DP25 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CALM3P0DP25 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms