Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC172P0C7W6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC172P0C7W6 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC172P0C7W6 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC172P0C7W6 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC172P0C7W6 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.06■□□□□ 0.32
CCDC172P0C7W6 AL353705.2-201ENST00000428243 662 ntBASIC17.06■□□□□ 0.32
CCDC172P0C7W6 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC172P0C7W6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 DNAJB3-201ENST00000446806 729 ntBASIC17.05■□□□□ 0.32
CCDC172P0C7W6 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 AC069335.1-201ENST00000489972 472 ntBASIC17.05■□□□□ 0.32
CCDC172P0C7W6 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 AC005829.1-201ENST00000570002 483 ntBASIC17.05■□□□□ 0.32
CCDC172P0C7W6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ELL2P1-201ENST00000413990 1906 ntBASIC17.05■□□□□ 0.32
CCDC172P0C7W6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC172P0C7W6 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC172P0C7W6 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms