Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 LINC01230-201ENST00000625222 3017 ntBASIC13.35□□□□□ -0.27
HLA-AP01891 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-AP01891 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-AP01891 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-AP01891 INTS4P1-203ENST00000641008 3683 ntBASIC13.35□□□□□ -0.27
HLA-AP01891 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-AP01891 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-AP01891 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-AP01891 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.35□□□□□ -0.27
HLA-AP01891 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
HLA-AP01891 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-AP01891 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
HLA-AP01891 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.34□□□□□ -0.27
HLA-AP01891 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-AP01891 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 PTCHD3P3-201ENST00000403073 906 ntBASIC13.34□□□□□ -0.27
HLA-AP01891 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-AP01891 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-AP01891 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-AP01891 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC13.34□□□□□ -0.27
HLA-AP01891 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.34□□□□□ -0.27
HLA-AP01891 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.34□□□□□ -0.27
HLA-AP01891 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 AC006504.5-208ENST00000588784 2401 ntBASIC13.34□□□□□ -0.27
HLA-AP01891 AC079781.5-202ENST00000641784 3743 ntBASIC13.34□□□□□ -0.27
HLA-AP01891 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.34□□□□□ -0.27
HLA-AP01891 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
HLA-AP01891 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.34□□□□□ -0.27
HLA-AP01891 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-AP01891 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-AP01891 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-AP01891 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-AP01891 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
HLA-AP01891 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-AP01891 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
HLA-AP01891 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 WASH6P-202ENST00000359512 1437 ntBASIC13.33□□□□□ -0.28
HLA-AP01891 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-AP01891 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 AC134407.2-201ENST00000625089 1978 ntBASIC13.33□□□□□ -0.28
HLA-AP01891 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.33□□□□□ -0.28
HLA-AP01891 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-AP01891 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-AP01891 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-AP01891 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 AL365330.1-201ENST00000607459 531 ntBASIC13.33□□□□□ -0.28
HLA-AP01891 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 AL691432.3-201ENST00000621860 400 ntBASIC13.33□□□□□ -0.28
HLA-AP01891 AL139288.1-201ENST00000623748 933 ntBASIC13.33□□□□□ -0.28
HLA-AP01891 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms