Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
TIMP1P01033 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TIMP1P01033 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.7■□□□□ 0.26
TIMP1P01033 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
TIMP1P01033 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TIMP1P01033 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
TIMP1P01033 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.69■□□□□ 0.26
TIMP1P01033 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC16.69■□□□□ 0.26
TIMP1P01033 AL353637.1-201ENST00000451571 732 ntBASIC16.69■□□□□ 0.26
TIMP1P01033 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.69■□□□□ 0.26
TIMP1P01033 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.69■□□□□ 0.26
TIMP1P01033 AC020922.3-201ENST00000595064 547 ntBASIC16.69■□□□□ 0.26
TIMP1P01033 AC011491.1-203ENST00000637688 543 ntBASIC16.69■□□□□ 0.26
TIMP1P01033 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TIMP1P01033 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.69■□□□□ 0.26
TIMP1P01033 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.69■□□□□ 0.26
TIMP1P01033 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TIMP1P01033 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TIMP1P01033 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TIMP1P01033 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
TIMP1P01033 AC022188.1-201ENST00000620960 1664 ntBASIC16.69■□□□□ 0.26
TIMP1P01033 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TIMP1P01033 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
TIMP1P01033 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.68■□□□□ 0.26
TIMP1P01033 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.68■□□□□ 0.26
TIMP1P01033 AC114501.1-201ENST00000445949 172 ntBASIC16.68■□□□□ 0.26
TIMP1P01033 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 AC125604.1-201ENST00000496255 707 ntBASIC16.68■□□□□ 0.26
TIMP1P01033 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.68■□□□□ 0.26
TIMP1P01033 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.68■□□□□ 0.26
TIMP1P01033 HLA-C-210ENST00000640219 976 ntBASIC16.68■□□□□ 0.26
TIMP1P01033 AC068587.8-201ENST00000641239 219 ntBASIC16.68■□□□□ 0.26
TIMP1P01033 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TIMP1P01033 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.68■□□□□ 0.26
TIMP1P01033 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TIMP1P01033 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.67■□□□□ 0.26
TIMP1P01033 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TIMP1P01033 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TIMP1P01033 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC16.67■□□□□ 0.26
TIMP1P01033 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC16.67■□□□□ 0.26
TIMP1P01033 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.67■□□□□ 0.26
TIMP1P01033 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC16.67■□□□□ 0.26
TIMP1P01033 AC098935.1-201ENST00000446057 611 ntBASIC16.67■□□□□ 0.26
TIMP1P01033 CEP164P1-201ENST00000455142 418 ntBASIC16.67■□□□□ 0.26
TIMP1P01033 RN7SL818P-201ENST00000485099 259 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms