Protein–RNA interactions for Protein: O75909

CCNK, Cyclin-K, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNKO75909 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.67□□□□□ -0.22
CCNKO75909 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CCNKO75909 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCNKO75909 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNKO75909 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.67□□□□□ -0.22
CCNKO75909 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNKO75909 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNKO75909 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC13.67□□□□□ -0.22
CCNKO75909 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCNKO75909 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CCNKO75909 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.67□□□□□ -0.22
CCNKO75909 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC13.67□□□□□ -0.22
CCNKO75909 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 ZNF444P1-201ENST00000559497 298 ntBASIC13.67□□□□□ -0.22
CCNKO75909 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC13.67□□□□□ -0.22
CCNKO75909 AL441883.1-201ENST00000566170 1045 ntBASIC13.67□□□□□ -0.22
CCNKO75909 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.67□□□□□ -0.22
CCNKO75909 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC13.67□□□□□ -0.22
CCNKO75909 GPR32P1-201ENST00000601788 811 ntBASIC13.67□□□□□ -0.22
CCNKO75909 AL138966.2-201ENST00000621997 464 ntBASIC13.67□□□□□ -0.22
CCNKO75909 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CCNKO75909 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.67□□□□□ -0.22
CCNKO75909 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.67□□□□□ -0.22
CCNKO75909 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CCNKO75909 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
CCNKO75909 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 AC011477.6-201ENST00000604980 1927 ntBASIC13.66□□□□□ -0.22
CCNKO75909 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCNKO75909 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC13.66□□□□□ -0.22
CCNKO75909 MMP23A-201ENST00000234610 1017 ntBASIC13.66□□□□□ -0.22
CCNKO75909 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCNKO75909 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 AP002414.1-201ENST00000391405 1147 ntBASIC13.66□□□□□ -0.22
CCNKO75909 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC13.66□□□□□ -0.22
CCNKO75909 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CCNKO75909 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CCNKO75909 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 CES1P1-201ENST00000421606 1704 ntBASIC13.66□□□□□ -0.22
CCNKO75909 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.66□□□□□ -0.22
CCNKO75909 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.66□□□□□ -0.22
CCNKO75909 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCNKO75909 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCNKO75909 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 KRT17P2-201ENST00000300992 1314 ntBASIC13.65□□□□□ -0.22
CCNKO75909 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCNKO75909 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.65□□□□□ -0.22
CCNKO75909 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.65□□□□□ -0.22
CCNKO75909 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCNKO75909 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms