Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC15.79■□□□□ 0.12
SMAD6O43541 U91328.1-201ENST00000437528 223 ntBASIC15.79■□□□□ 0.12
SMAD6O43541 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 TTTY23B-201ENST00000442790 549 ntBASIC15.79■□□□□ 0.12
SMAD6O43541 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.79■□□□□ 0.12
SMAD6O43541 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.79■□□□□ 0.12
SMAD6O43541 RPL13AP25-201ENST00000484130 612 ntBASIC15.79■□□□□ 0.12
SMAD6O43541 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.79■□□□□ 0.12
SMAD6O43541 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.79■□□□□ 0.12
SMAD6O43541 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.79■□□□□ 0.12
SMAD6O43541 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.79■□□□□ 0.12
SMAD6O43541 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.79■□□□□ 0.12
SMAD6O43541 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.79■□□□□ 0.12
SMAD6O43541 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SMAD6O43541 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SMAD6O43541 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SMAD6O43541 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.79■□□□□ 0.12
SMAD6O43541 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.78■□□□□ 0.12
SMAD6O43541 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMAD6O43541 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.78■□□□□ 0.12
SMAD6O43541 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.78■□□□□ 0.12
SMAD6O43541 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMAD6O43541 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.78■□□□□ 0.12
SMAD6O43541 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
SMAD6O43541 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.78■□□□□ 0.12
SMAD6O43541 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.78■□□□□ 0.12
SMAD6O43541 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.78■□□□□ 0.12
SMAD6O43541 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.78■□□□□ 0.12
SMAD6O43541 GAPDHP40-201ENST00000505218 1006 ntBASIC15.78■□□□□ 0.12
SMAD6O43541 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.78■□□□□ 0.12
SMAD6O43541 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
SMAD6O43541 AC025181.2-201ENST00000606994 802 ntBASIC15.78■□□□□ 0.12
SMAD6O43541 AC107373.2-201ENST00000607735 490 ntBASIC15.78■□□□□ 0.12
SMAD6O43541 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.78■□□□□ 0.12
SMAD6O43541 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 AC084364.1-201ENST00000551967 1556 ntBASIC15.78■□□□□ 0.12
SMAD6O43541 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SMAD6O43541 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SMAD6O43541 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SMAD6O43541 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.77■□□□□ 0.12
SMAD6O43541 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.77■□□□□ 0.12
SMAD6O43541 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.77■□□□□ 0.12
SMAD6O43541 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.77■□□□□ 0.12
SMAD6O43541 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 AC090616.6-203ENST00000579186 1945 ntBASIC15.77■□□□□ 0.12
SMAD6O43541 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SMAD6O43541 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms