Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.97■□□□□ 0.15
RIPK2O43353 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.97■□□□□ 0.15
RIPK2O43353 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.97■□□□□ 0.15
RIPK2O43353 PRKN-208ENST00000610470 531 ntTSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 PRKN-209ENST00000612485 225 ntTSL 5 BASIC15.97■□□□□ 0.15
RIPK2O43353 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
RIPK2O43353 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.97■□□□□ 0.15
RIPK2O43353 AC004877.2-201ENST00000623941 599 ntBASIC15.97■□□□□ 0.15
RIPK2O43353 BX640514.1-201ENST00000583223 1918 ntBASIC15.97■□□□□ 0.15
RIPK2O43353 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.97■□□□□ 0.15
RIPK2O43353 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.97■□□□□ 0.15
RIPK2O43353 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RIPK2O43353 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RIPK2O43353 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RIPK2O43353 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RIPK2O43353 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.96■□□□□ 0.15
RIPK2O43353 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.96■□□□□ 0.15
RIPK2O43353 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.96■□□□□ 0.15
RIPK2O43353 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RIPK2O43353 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.96■□□□□ 0.15
RIPK2O43353 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.96■□□□□ 0.15
RIPK2O43353 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 RPL5P21-201ENST00000404620 815 ntBASIC15.96■□□□□ 0.15
RIPK2O43353 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.96■□□□□ 0.15
RIPK2O43353 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.96■□□□□ 0.15
RIPK2O43353 KRT19P2-202ENST00000557173 1012 ntBASIC15.96■□□□□ 0.15
RIPK2O43353 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.96■□□□□ 0.15
RIPK2O43353 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.96■□□□□ 0.15
RIPK2O43353 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.96■□□□□ 0.15
RIPK2O43353 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.96■□□□□ 0.15
RIPK2O43353 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.96■□□□□ 0.15
RIPK2O43353 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.96■□□□□ 0.15
RIPK2O43353 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.96■□□□□ 0.15
RIPK2O43353 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 PCDHA3-202ENST00000532566 4594 ntBASIC15.96■□□□□ 0.15
RIPK2O43353 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
RIPK2O43353 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 REXO1L2P-201ENST00000425429 2069 ntBASIC15.96■□□□□ 0.15
RIPK2O43353 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.96■□□□□ 0.15
RIPK2O43353 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RIPK2O43353 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.96■□□□□ 0.14
RIPK2O43353 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RIPK2O43353 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RIPK2O43353 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RIPK2O43353 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RIPK2O43353 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RIPK2O43353 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RIPK2O43353 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RIPK2O43353 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 RNA5SP415-201ENST00000517246 115 ntBASIC15.95■□□□□ 0.14
RIPK2O43353 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.95■□□□□ 0.14
RIPK2O43353 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.95■□□□□ 0.14
RIPK2O43353 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms