Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AC126177.1-201ENST00000547829 2218 ntBASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AC013268.4-201ENST00000637413 2228 ntBASIC14.92□□□□□ -0.02
LRIT2A6NDA9 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 UGT1A2P-201ENST00000454886 866 ntBASIC14.92□□□□□ -0.02
LRIT2A6NDA9 MEIS3P1-201ENST00000495167 958 ntBASIC14.92□□□□□ -0.02
LRIT2A6NDA9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AC015910.1-201ENST00000579400 975 ntBASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRIT2A6NDA9 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 AC112693.3-201ENST00000624819 1983 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 AC104794.3-201ENST00000566840 1248 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 AJ011932.1-201ENST00000621707 465 ntBASIC14.91□□□□□ -0.02
LRIT2A6NDA9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRIT2A6NDA9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 AC084364.1-201ENST00000551967 1556 ntBASIC14.9□□□□□ -0.02
LRIT2A6NDA9 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRIT2A6NDA9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms