Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CALY-202ENST00000368555 783 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 FO393414.2-201ENST00000405153 598 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CRB3P1-201ENST00000449338 276 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC135586.1-201ENST00000539323 574 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC044860.1-202ENST00000559481 777 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC004233.3-201ENST00000607794 1269 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 RNA5-8SN1-201ENST00000610460 153 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 TEX48-202ENST00000612244 662 ntTSL 3 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 RNA5-8SN5-202ENST00000612463 153 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 RNA5-8SN4-201ENST00000613359 153 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 RNA5-8SN5-201ENST00000619471 153 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AF228730.6-201ENST00000641497 218 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC084121.3-201ENST00000641716 218 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 AC105233.6-201ENST00000642093 218 ntBASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.6□□□□□ -0.71
LRCOL1A6NCL2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LRCOL1A6NCL2 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms