Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 AC098859.1-201ENST00000502915 1238 ntBASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 AC018529.2-202ENST00000611482 3087 ntBASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
TCRBV3S1A0A5B6 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 AC084364.1-201ENST00000551967 1556 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 KRT8P37-201ENST00000451609 1420 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 TSPY19P-201ENST00000418461 509 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 GHSR-202ENST00000427970 912 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 TSPY18P-201ENST00000441642 509 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 AL049597.2-201ENST00000565575 961 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 AC087388.1-201ENST00000571370 1112 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TCRBV3S1A0A5B6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AC015802.1-201ENST00000588104 1449 ntBASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 IGLL3P-201ENST00000412472 434 ntBASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AC140658.5-201ENST00000438532 169 ntBASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AC012640.2-201ENST00000561606 901 ntBASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AC073389.1-201ENST00000595595 795 ntBASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TCRBV3S1A0A5B6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms