Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AZGP1P1-201ENST00000411909 902 ntBASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 BTNL10-201ENST00000595971 695 ntBASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC008735.3-201ENST00000596646 500 ntBASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 LINC01115-203ENST00000606068 577 ntBASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AL391069.4-201ENST00000609583 481 ntBASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AL158212.4-201ENST00000624062 1286 ntBASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SSX2IPQ9Y2D8 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 AC092171.3-201ENST00000610122 2651 ntBASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SSX2IPQ9Y2D8 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 AC078925.2-201ENST00000624013 1973 ntBASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 TOMM22P5-201ENST00000416399 439 ntBASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 KRT223P-202ENST00000449164 1292 ntBASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 ENPP7P5-201ENST00000541031 1031 ntBASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 COX11-210ENST00000639671 696 ntBASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 AP001282.1-201ENST00000531301 1499 ntBASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.92■□□□□ 0.3
SSX2IPQ9Y2D8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms