Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC132938.2-201ENST00000579188 680 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AC116165.1-201ENST00000611806 668 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AL591163.1-201ENST00000641757 987 ntBASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NPIPA1Q9UND3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 AL512384.1-201ENST00000406683 331 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 U91328.1-201ENST00000437528 223 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 ATP5G2P4-201ENST00000442175 420 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 MYCLP2-201ENST00000449268 967 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 TIMM17BP1-201ENST00000545713 516 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 IGHV3-72-202ENST00000621503 303 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 AL161772.1-201ENST00000610494 4412 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 CYP4F24P-201ENST00000586049 1580 ntBASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPIPA1Q9UND3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 AC069224.1-201ENST00000566372 1715 ntBASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPIPA1Q9UND3 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms