Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
RIMS3Q9UJD0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 AC092474.2-201ENST00000424288 719 ntBASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RIMS3Q9UJD0 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 IGHV3-22-201ENST00000520721 359 ntBASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 MIR4321-201ENST00000592276 80 ntBASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 AL078644.1-201ENST00000609881 752 ntBASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 AC007064.4-201ENST00000637740 555 ntBASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 MBLAC2-202ENST00000514906 1936 ntBASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RIMS3Q9UJD0 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RIMS3Q9UJD0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms