Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 AL512361.1-201ENST00000554200 418 ntBASIC13.49□□□□□ -0.25
GCM1Q9NP62 SPCS2P1-201ENST00000561636 679 ntBASIC13.49□□□□□ -0.25
GCM1Q9NP62 AC010336.2-201ENST00000564226 506 ntBASIC13.49□□□□□ -0.25
GCM1Q9NP62 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 AL096865.1-201ENST00000606796 927 ntBASIC13.49□□□□□ -0.25
GCM1Q9NP62 AL844908.2-201ENST00000609461 460 ntBASIC13.49□□□□□ -0.25
GCM1Q9NP62 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.49□□□□□ -0.25
GCM1Q9NP62 AC010491.1-201ENST00000563101 2797 ntBASIC13.49□□□□□ -0.25
GCM1Q9NP62 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
GCM1Q9NP62 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
GCM1Q9NP62 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AZGP1P1-201ENST00000411909 902 ntBASIC13.48□□□□□ -0.25
GCM1Q9NP62 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AC009477.1-201ENST00000452936 217 ntBASIC13.48□□□□□ -0.25
GCM1Q9NP62 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 ZNF890P-202ENST00000530367 1156 ntBASIC13.48□□□□□ -0.25
GCM1Q9NP62 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 AC022144.1-201ENST00000602255 1580 ntBASIC13.48□□□□□ -0.25
GCM1Q9NP62 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.48□□□□□ -0.25
GCM1Q9NP62 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
GCM1Q9NP62 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AL596257.1-201ENST00000641463 2694 ntBASIC13.47□□□□□ -0.25
GCM1Q9NP62 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.47□□□□□ -0.25
GCM1Q9NP62 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.47□□□□□ -0.25
GCM1Q9NP62 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
GCM1Q9NP62 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms