Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 MIR770-201ENST00000390219 98 ntBASIC13.81□□□□□ -0.2
CDH20Q9HBT6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 RNA5SP421-201ENST00000516864 134 ntBASIC13.81□□□□□ -0.2
CDH20Q9HBT6 EHF-205ENST00000527935 557 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 AL590560.3-201ENST00000623350 461 ntBASIC13.81□□□□□ -0.2
CDH20Q9HBT6 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 AC087499.5-201ENST00000452760 1342 ntBASIC13.81□□□□□ -0.2
CDH20Q9HBT6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDH20Q9HBT6 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 PRAL-201ENST00000624952 3286 ntBASIC13.8□□□□□ -0.2
CDH20Q9HBT6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.8□□□□□ -0.2
CDH20Q9HBT6 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 AC005498.2-205ENST00000593218 784 ntBASIC13.8□□□□□ -0.2
CDH20Q9HBT6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.8□□□□□ -0.2
CDH20Q9HBT6 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDH20Q9HBT6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.79□□□□□ -0.2
CDH20Q9HBT6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms