Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
PIF1Q9H611 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.11■□□□□ 0.01
PIF1Q9H611 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 LINC00528-201ENST00000600723 2160 ntBASIC15.11■□□□□ 0.01
PIF1Q9H611 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 FAM45BP-202ENST00000592932 1624 ntBASIC15.11■□□□□ 0.01
PIF1Q9H611 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
PIF1Q9H611 AC009947.1-201ENST00000444350 727 ntBASIC15.11■□□□□ 0.01
PIF1Q9H611 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 Z83851.2-201ENST00000609564 659 ntBASIC15.11■□□□□ 0.01
PIF1Q9H611 AC010507.1-201ENST00000633895 436 ntBASIC15.11■□□□□ 0.01
PIF1Q9H611 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.11■□□□□ 0.01
PIF1Q9H611 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.11■□□□□ 0.01
PIF1Q9H611 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.11■□□□□ 0.01
PIF1Q9H611 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.11■□□□□ 0.01
PIF1Q9H611 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.11■□□□□ 0.01
PIF1Q9H611 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
PIF1Q9H611 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PIF1Q9H611 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PIF1Q9H611 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC15.1■□□□□ 0.01
PIF1Q9H611 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.1■□□□□ 0.01
PIF1Q9H611 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.1■□□□□ 0.01
PIF1Q9H611 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.1■□□□□ 0.01
PIF1Q9H611 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.1■□□□□ 0.01
PIF1Q9H611 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 AC109635.5-201ENST00000533593 962 ntBASIC15.1■□□□□ 0.01
PIF1Q9H611 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.1■□□□□ 0.01
PIF1Q9H611 RN7SL371P-201ENST00000578099 267 ntBASIC15.1■□□□□ 0.01
PIF1Q9H611 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.1■□□□□ 0.01
PIF1Q9H611 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.1■□□□□ 0.01
PIF1Q9H611 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.1■□□□□ 0.01
PIF1Q9H611 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PIF1Q9H611 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PIF1Q9H611 IL9RP2-201ENST00000423948 1312 ntBASIC15.1■□□□□ 0.01
PIF1Q9H611 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.1■□□□□ 0.01
PIF1Q9H611 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PIF1Q9H611 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PIF1Q9H611 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PIF1Q9H611 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms