Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.19□□□□□ -0.3
CCL13Q99616 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC13.19□□□□□ -0.3
CCL13Q99616 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CCL13Q99616 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CCL13Q99616 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.18□□□□□ -0.3
CCL13Q99616 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CCL13Q99616 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 BTBD7P1-201ENST00000447253 1453 ntBASIC13.18□□□□□ -0.3
CCL13Q99616 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL13Q99616 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCL13Q99616 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCL13Q99616 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCL13Q99616 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.18□□□□□ -0.3
CCL13Q99616 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 TSPY16P-201ENST00000449843 468 ntBASIC13.18□□□□□ -0.3
CCL13Q99616 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL13Q99616 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC13.18□□□□□ -0.3
CCL13Q99616 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.18□□□□□ -0.3
CCL13Q99616 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 HLA-DQB2-231ENST00000435145 2026 ntBASIC13.18□□□□□ -0.3
CCL13Q99616 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCL13Q99616 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCL13Q99616 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL13Q99616 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL13Q99616 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CCL13Q99616 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCL13Q99616 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL13Q99616 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.17□□□□□ -0.3
CCL13Q99616 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL13Q99616 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCL13Q99616 KRT18P64-201ENST00000434946 1219 ntBASIC13.17□□□□□ -0.3
CCL13Q99616 AC114501.2-201ENST00000439631 535 ntBASIC13.17□□□□□ -0.3
CCL13Q99616 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL13Q99616 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL13Q99616 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.17□□□□□ -0.3
CCL13Q99616 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.17□□□□□ -0.3
CCL13Q99616 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL13Q99616 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CCL13Q99616 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.17□□□□□ -0.3
CCL13Q99616 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
CCL13Q99616 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.17□□□□□ -0.3
CCL13Q99616 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL13Q99616 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL13Q99616 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.17□□□□□ -0.3
CCL13Q99616 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 AL161772.1-201ENST00000610494 4412 ntBASIC13.17□□□□□ -0.3
CCL13Q99616 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCL13Q99616 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms