Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 AP3S2-216ENST00000617003 1561 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 AL353705.2-201ENST00000428243 662 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 CNN2P11-201ENST00000429351 262 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.04□□□□□ -0.32
S1PR3Q99500 SLC25A39P2-201ENST00000537614 270 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.04□□□□□ -0.32
S1PR3Q99500 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.04□□□□□ -0.32
S1PR3Q99500 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.04□□□□□ -0.32
S1PR3Q99500 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.04□□□□□ -0.32
S1PR3Q99500 AL596442.2-201ENST00000610240 980 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 AC084121.4-201ENST00000641598 221 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 AF228730.8-201ENST00000642140 221 ntBASIC13.04□□□□□ -0.32
S1PR3Q99500 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.04□□□□□ -0.32
S1PR3Q99500 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.04□□□□□ -0.32
S1PR3Q99500 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
S1PR3Q99500 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
S1PR3Q99500 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 AC023157.3-201ENST00000619086 2088 ntBASIC13.03□□□□□ -0.32
S1PR3Q99500 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.03□□□□□ -0.32
S1PR3Q99500 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.03□□□□□ -0.32
S1PR3Q99500 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
S1PR3Q99500 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.03□□□□□ -0.32
S1PR3Q99500 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 AL627223.1-201ENST00000416693 442 ntBASIC13.03□□□□□ -0.32
S1PR3Q99500 KRT18P32-201ENST00000424695 1287 ntBASIC13.03□□□□□ -0.32
S1PR3Q99500 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.03□□□□□ -0.32
S1PR3Q99500 DNAJB3-202ENST00000449667 1266 ntBASIC13.03□□□□□ -0.32
S1PR3Q99500 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.03□□□□□ -0.32
S1PR3Q99500 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.03□□□□□ -0.32
S1PR3Q99500 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.03□□□□□ -0.32
S1PR3Q99500 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 RARRES2P9-201ENST00000565168 469 ntBASIC13.03□□□□□ -0.32
S1PR3Q99500 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.03□□□□□ -0.32
S1PR3Q99500 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
S1PR3Q99500 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.03□□□□□ -0.32
S1PR3Q99500 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.03□□□□□ -0.32
S1PR3Q99500 KRT8P37-201ENST00000451609 1420 ntBASIC13.03□□□□□ -0.32
S1PR3Q99500 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
S1PR3Q99500 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
S1PR3Q99500 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.03□□□□□ -0.32
S1PR3Q99500 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
S1PR3Q99500 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms