Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC85AQ96PX6 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 AC005229.1-201ENST00000392885 409 ntBASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 MIR4538-201ENST00000581377 78 ntBASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC85AQ96PX6 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AC012441.1-201ENST00000446669 685 ntBASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AP001063.1-201ENST00000568332 529 ntBASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AC015910.1-201ENST00000579400 975 ntBASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 AC112504.1-201ENST00000623415 1841 ntBASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CCDC85AQ96PX6 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC85AQ96PX6 CSF2RBP1-201ENST00000447905 391 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms