Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.75■□□□□ 0.11
SIPA1Q96FS4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 RPL7P3-201ENST00000441388 714 ntBASIC15.74■□□□□ 0.11
SIPA1Q96FS4 AC012441.1-201ENST00000446669 685 ntBASIC15.74■□□□□ 0.11
SIPA1Q96FS4 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 AC093433.1-201ENST00000458048 571 ntBASIC15.74■□□□□ 0.11
SIPA1Q96FS4 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.74■□□□□ 0.11
SIPA1Q96FS4 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 FAM86MP-201ENST00000340703 885 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AC092933.1-201ENST00000393644 945 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AL133267.1-201ENST00000398220 340 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AC099336.1-201ENST00000417053 1171 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 CSF2RBP1-201ENST00000447905 391 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AC026410.3-201ENST00000514280 936 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AL583810.1-201ENST00000553344 1045 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 AC093813.1-201ENST00000605066 256 ntBASIC15.73■□□□□ 0.11
SIPA1Q96FS4 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SIPA1Q96FS4 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SIPA1Q96FS4 MSTO2P-201ENST00000314835 1709 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms