Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 AC018892.3-201ENST00000623986 2499 ntBASIC15.23■□□□□ 0.03
RNF31Q96EP0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 ATP5G2P4-201ENST00000442175 420 ntBASIC15.23■□□□□ 0.03
RNF31Q96EP0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 ELK1P1-201ENST00000485699 580 ntBASIC15.23■□□□□ 0.03
RNF31Q96EP0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 SDHAP3-202ENST00000515467 728 ntBASIC15.23■□□□□ 0.03
RNF31Q96EP0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 MIR4321-201ENST00000592276 80 ntBASIC15.23■□□□□ 0.03
RNF31Q96EP0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 CU639417.3-201ENST00000624240 1404 ntBASIC15.23■□□□□ 0.03
RNF31Q96EP0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.23■□□□□ 0.03
RNF31Q96EP0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
RNF31Q96EP0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 SPDYE17-201ENST00000412399 783 ntBASIC15.22■□□□□ 0.03
RNF31Q96EP0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 RN7SL837P-201ENST00000463010 287 ntBASIC15.22■□□□□ 0.03
RNF31Q96EP0 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC025048.3-201ENST00000590609 569 ntBASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC005702.4-201ENST00000618393 416 ntBASIC15.22■□□□□ 0.03
RNF31Q96EP0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 CDC14C-201ENST00000428251 1719 ntBASIC15.22■□□□□ 0.03
RNF31Q96EP0 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF31Q96EP0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF31Q96EP0 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF31Q96EP0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms