Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 BNIP3P13-201ENST00000599968 566 ntBASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 AC011491.1-203ENST00000637688 543 ntBASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 AP001094.4-201ENST00000579008 2176 ntBASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TRIM43Q96BQ3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 SLC16A6P1-201ENST00000413214 1059 ntBASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 EIF3FP3-201ENST00000434851 1086 ntBASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 AL353770.1-201ENST00000614915 403 ntBASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 AL805961.1-203ENST00000641078 1258 ntBASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 AC004923.1-202ENST00000642106 209 ntBASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 AL645608.8-201ENST00000606034 2086 ntBASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TRIM43Q96BQ3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 ME2P1-201ENST00000426028 1970 ntBASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 CEP164P1-201ENST00000455142 418 ntBASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 AC106820.3-201ENST00000561653 397 ntBASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 RN7SL736P-201ENST00000613111 269 ntBASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TRIM43Q96BQ3 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms