Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
SH3KBP1Q96B97 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SH3KBP1Q96B97 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
SH3KBP1Q96B97 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 SPTLC1P1-201ENST00000447199 261 ntBASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 CRB3P1-201ENST00000449338 276 ntBASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AC010336.2-201ENST00000564226 506 ntBASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AC008738.7-201ENST00000609744 511 ntBASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AF228730.6-201ENST00000641497 218 ntBASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AC084121.3-201ENST00000641716 218 ntBASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AC105233.6-201ENST00000642093 218 ntBASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SH3KBP1Q96B97 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 HYMAI-201ENST00000635591 3347 ntBASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 AC004987.2-201ENST00000395959 1148 ntBASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 AL512361.1-201ENST00000554200 418 ntBASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 AC243562.2-201ENST00000561247 970 ntBASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.63■□□□□ 0.09
SH3KBP1Q96B97 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AL353779.1-201ENST00000434793 351 ntBASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.62■□□□□ 0.09
SH3KBP1Q96B97 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 308.9 ms