Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
SHKBP1Q8TBC3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 BOLA2P3-201ENST00000404566 256 ntBASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 ACTG1P3-201ENST00000431775 1114 ntBASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHKBP1Q8TBC3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 KRT43P-201ENST00000434019 910 ntBASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AC104989.1-201ENST00000519711 778 ntBASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AC124283.3-201ENST00000570869 594 ntBASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AC097359.3-201ENST00000603982 1210 ntBASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 LINC02228-204ENST00000642115 2962 ntBASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AC104640.1-201ENST00000562617 2109 ntBASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHKBP1Q8TBC3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 INTS4P2-202ENST00000614726 2019 ntBASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SHKBP1Q8TBC3 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms