Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 DNAI2-206ENST00000582036 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 AL359510.2-201ENST00000624958 2249 ntBASIC9.58□□□□□ -0.88
SVIPQ8NHG7 DGKA-201ENST00000331886 2909 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 HEXIM1-201ENST00000332499 3600 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 SMPD4P2-201ENST00000440167 1634 ntBASIC9.58□□□□□ -0.88
SVIPQ8NHG7 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 GNAS-209ENST00000371081 730 ntTSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 AC023632.6-201ENST00000624338 2177 ntBASIC9.58□□□□□ -0.88
SVIPQ8NHG7 ADD1-206ENST00000398129 3787 ntAPPRIS ALT1 TSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 SMARCAL1-201ENST00000357276 3271 ntAPPRIS P2 TSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 AL162456.1-201ENST00000634535 2006 ntBASIC9.58□□□□□ -0.88
SVIPQ8NHG7 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 MAPK10-262ENST00000641051 5738 ntBASIC9.58□□□□□ -0.88
SVIPQ8NHG7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 AC055813.1-201ENST00000587110 2123 ntBASIC9.58□□□□□ -0.88
SVIPQ8NHG7 AC055713.1-201ENST00000498967 8279 ntTSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 LINC01854-201ENST00000375987 2213 ntTSL 2 BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 PELO-201ENST00000274311 4349 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SVIPQ8NHG7 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 OXCT1-204ENST00000509987 1441 ntTSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 FLNB-AS1-202ENST00000488720 3709 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 DAPK2-201ENST00000261891 2603 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 PDHA1-204ENST00000379806 3484 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 AC099494.3-201ENST00000623645 1722 ntBASIC9.57□□□□□ -0.88
SVIPQ8NHG7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 IL36RN-201ENST00000346807 2672 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 AC090607.3-201ENST00000559954 388 ntTSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 LINC02260-201ENST00000508484 2216 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 DNMT3A-203ENST00000380746 3589 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 VPS45-211ENST00000535106 2695 ntTSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 NBN-203ENST00000409330 4523 ntTSL 5 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 PPP3CB-AS1-203ENST00000442133 2888 ntTSL 3 BASIC9.57□□□□□ -0.88
SVIPQ8NHG7 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms