Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC21.71■■□□□ 1.07
UBR1Q8IWV7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
UBR1Q8IWV7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBR1Q8IWV7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
UBR1Q8IWV7 AC025271.4-201ENST00000621477 1726 ntBASIC21.71■■□□□ 1.07
UBR1Q8IWV7 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
UBR1Q8IWV7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC078875.1-201ENST00000431907 724 ntBASIC21.69■■□□□ 1.06
UBR1Q8IWV7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 NAGK-204ENST00000443872 878 ntTSL 3 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 FOS-204ENST00000554617 796 ntTSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 RPL35-206ENST00000629845 340 ntTSL 5 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC074138.1-201ENST00000611182 1303 ntBASIC21.69■■□□□ 1.06
UBR1Q8IWV7 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AK6-201ENST00000380818 1183 ntTSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC234644.1-201ENST00000406065 370 ntBASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC097065.1-201ENST00000425737 517 ntBASIC21.69■■□□□ 1.06
UBR1Q8IWV7 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 DUX4L46-201ENST00000566845 751 ntBASIC21.69■■□□□ 1.06
UBR1Q8IWV7 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 MIR6842-201ENST00000612539 65 ntBASIC21.69■■□□□ 1.06
UBR1Q8IWV7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC21.69■■□□□ 1.06
UBR1Q8IWV7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
UBR1Q8IWV7 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.67■■□□□ 1.06
UBR1Q8IWV7 RPS9P1-201ENST00000419943 583 ntBASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms