Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 BANF1P1-201ENST00000553684 263 ntBASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 AC105021.1-202ENST00000570572 669 ntBASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 AC018529.1-201ENST00000613063 361 ntBASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 AC091951.1-201ENST00000512854 2465 ntBASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 GPS2P2-201ENST00000430745 888 ntBASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 EEF1DP4-201ENST00000446006 880 ntBASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 AC092865.5-201ENST00000545435 363 ntBASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 HNRNPUP1-201ENST00000554987 333 ntBASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 AC004835.2-201ENST00000603762 682 ntBASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 AL365209.1-201ENST00000624418 6473 ntBASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
LINC00346Q8IVM7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 MYO15B-237ENST00000642007 4893 ntBASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LINC00346Q8IVM7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 UPF3AP3-201ENST00000420996 769 ntBASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 MTND6P24-201ENST00000440466 518 ntBASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 SPDYE14P-201ENST00000442619 822 ntBASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 AP000344.2-201ENST00000512987 629 ntBASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00346Q8IVM7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms