Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 TP73-AS1-210ENST00000637775 1455 ntBASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 AP001350.2-201ENST00000625104 1094 ntBASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 AP000867.4-201ENST00000641616 219 ntBASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 LSS-211ENST00000522411 2523 ntTSL 2 BASIC14.32□□□□□ -0.12
CROCCP3Q8IVE0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AC073869.1-201ENST00000415574 2762 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 MIR4497-201ENST00000583208 89 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AL353135.1-201ENST00000606729 504 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AC139887.4-201ENST00000607877 719 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AC010331.1-201ENST00000611423 582 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 HYMAI.1-201ENST00000620949 238 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 U82695.1-201ENST00000635752 1889 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 INTS4P1-201ENST00000438455 1935 ntBASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CROCCP3Q8IVE0 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms