Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 AC024267.1-201ENST00000582320 895 ntBASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 AL359258.3-201ENST00000622910 2331 ntBASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 UNC93B6-202ENST00000528242 690 ntBASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 AL121912.1-201ENST00000603683 238 ntBASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 AC139749.1-202ENST00000617529 3139 ntBASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NUDCD3Q8IVD9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 AC004987.2-201ENST00000395959 1148 ntBASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 AC098859.1-201ENST00000502915 1238 ntBASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 AC012313.10-201ENST00000623509 926 ntBASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
NUDCD3Q8IVD9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms