Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 TCAF2P1-201ENST00000291129 2421 ntBASIC14.56□□□□□ -0.08
VRK2Q86Y07 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 SPDYE17-201ENST00000412399 783 ntBASIC14.56□□□□□ -0.08
VRK2Q86Y07 AL645939.2-201ENST00000427340 991 ntBASIC14.56□□□□□ -0.08
VRK2Q86Y07 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VRK2Q86Y07 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VRK2Q86Y07 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.55□□□□□ -0.08
VRK2Q86Y07 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.55□□□□□ -0.08
VRK2Q86Y07 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.55□□□□□ -0.08
VRK2Q86Y07 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VRK2Q86Y07 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
VRK2Q86Y07 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
VRK2Q86Y07 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms