Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AF228730.6-201ENST00000641497 218 ntBASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AC084121.3-201ENST00000641716 218 ntBASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.82■□□□□ 0.12
LYSMD3Q7Z3D4 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 RPL13P2-201ENST00000440687 659 ntBASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 BTBD7P1-201ENST00000447253 1453 ntBASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
LYSMD3Q7Z3D4 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 SLED1-202ENST00000512051 380 ntBASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 AC104794.3-201ENST00000566840 1248 ntBASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 5S_rRNA.22-201ENST00000614916 106 ntBASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
LYSMD3Q7Z3D4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms