Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.68■□□□□ 0.74
COPS6Q7L5N1 PGGT1BP2-201ENST00000398621 1028 ntBASIC19.68■□□□□ 0.74
COPS6Q7L5N1 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 AC026954.1-201ENST00000429771 1293 ntBASIC19.68■□□□□ 0.74
COPS6Q7L5N1 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 KRT90P-201ENST00000549264 1064 ntBASIC19.68■□□□□ 0.74
COPS6Q7L5N1 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 BX539320.1-201ENST00000623759 877 ntBASIC19.68■□□□□ 0.74
COPS6Q7L5N1 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 PRAL-201ENST00000624952 3286 ntBASIC19.68■□□□□ 0.74
COPS6Q7L5N1 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.68■□□□□ 0.74
COPS6Q7L5N1 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 AC145423.3-201ENST00000615987 467 ntBASIC19.67■□□□□ 0.74
COPS6Q7L5N1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 CICP13-201ENST00000422015 2789 ntBASIC19.67■□□□□ 0.74
COPS6Q7L5N1 AL391005.1-201ENST00000623953 2435 ntBASIC19.67■□□□□ 0.74
COPS6Q7L5N1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
COPS6Q7L5N1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 AC009090.5-201ENST00000624886 2285 ntBASIC19.66■□□□□ 0.74
COPS6Q7L5N1 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 FAM86MP-201ENST00000340703 885 ntBASIC19.66■□□□□ 0.74
COPS6Q7L5N1 RPF1-202ENST00000370656 724 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 AC025279.2-201ENST00000569730 653 ntBASIC19.66■□□□□ 0.74
COPS6Q7L5N1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 AC084364.1-201ENST00000551967 1556 ntBASIC19.66■□□□□ 0.74
COPS6Q7L5N1 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
COPS6Q7L5N1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS6Q7L5N1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
COPS6Q7L5N1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
COPS6Q7L5N1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
COPS6Q7L5N1 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms