Protein–RNA interactions for Protein: Q6ZMN7

PDZRN4, PDZ domain-containing RING finger protein 4, humanhuman

Predicted RBP Predictions only

Length 1,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN4Q6ZMN7 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 AC112191.1-201ENST00000523689 701 ntBASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 REXO1L3P-201ENST00000622202 1288 ntBASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 AL645728.2-201ENST00000641974 660 ntBASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 AC092919.2-201ENST00000623631 1645 ntBASIC18.2■□□□□ 0.5
PDZRN4Q6ZMN7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 AC009090.5-201ENST00000624886 2285 ntBASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 STOM-202ENST00000347359 870 ntTSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PDZRN4Q6ZMN7 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 AC107918.4-201ENST00000641966 3141 ntBASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 AL355385.1-201ENST00000606123 409 ntBASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 AL513210.1-201ENST00000629608 234 ntBASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PDZRN4Q6ZMN7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms