Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 PRAL-201ENST00000624952 3286 ntBASIC16.73■□□□□ 0.27
VSTM1Q6UX27 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 AC098614.1-201ENST00000368528 745 ntBASIC16.73■□□□□ 0.27
VSTM1Q6UX27 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 CR383656.12-201ENST00000549567 513 ntBASIC16.73■□□□□ 0.27
VSTM1Q6UX27 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 CHCHD2P3-201ENST00000603038 451 ntBASIC16.73■□□□□ 0.27
VSTM1Q6UX27 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
VSTM1Q6UX27 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AC063926.2-201ENST00000623766 1308 ntBASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 TOMM22P5-201ENST00000416399 439 ntBASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 SLED1-202ENST00000512051 380 ntBASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AC097359.3-201ENST00000603982 1210 ntBASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AC093726.1-201ENST00000608064 963 ntBASIC16.72■□□□□ 0.27
VSTM1Q6UX27 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
VSTM1Q6UX27 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSTM1Q6UX27 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
VSTM1Q6UX27 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VSTM1Q6UX27 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VSTM1Q6UX27 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.71■□□□□ 0.27
VSTM1Q6UX27 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
VSTM1Q6UX27 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
VSTM1Q6UX27 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms