Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 AC069224.1-201ENST00000566372 1715 ntBASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RFWD3Q6PCD5 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 TARDBPP1-201ENST00000442013 1203 ntBASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 LINC02447-202ENST00000501888 2146 ntBASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 AL450472.2-201ENST00000603663 1156 ntBASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CDC14C-201ENST00000428251 1719 ntBASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 AC022532.1-201ENST00000624563 1728 ntBASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 Z97205.2-201ENST00000564697 1639 ntBASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.41■□□□□ 0.22
RFWD3Q6PCD5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AC074338.1-201ENST00000416825 156 ntBASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AF228730.6-201ENST00000641497 218 ntBASIC16.4■□□□□ 0.22
RFWD3Q6PCD5 AC084121.3-201ENST00000641716 218 ntBASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms