Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 MSTO2P-201ENST00000314835 1709 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 BAATP1-201ENST00000412284 1225 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 AL117351.1-201ENST00000438864 766 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 TTTY14-204ENST00000452584 860 ntTSL 3 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 AC093433.1-201ENST00000458048 571 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 AC093813.1-201ENST00000605066 256 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 AC092953.2-201ENST00000608000 699 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 AC020910.4-201ENST00000612269 540 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 CYP2T1P-202ENST00000641596 2535 ntBASIC16.6■□□□□ 0.25
VARS2Q5ST30 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.6■□□□□ 0.25
VARS2Q5ST30 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
VARS2Q5ST30 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 TEX30-203ENST00000376022 828 ntTSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 AL355864.2-201ENST00000447420 863 ntBASIC16.59■□□□□ 0.25
VARS2Q5ST30 CTBP2P5-201ENST00000454986 1264 ntBASIC16.59■□□□□ 0.25
VARS2Q5ST30 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 AC134312.5-201ENST00000568031 1313 ntBASIC16.59■□□□□ 0.25
VARS2Q5ST30 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
VARS2Q5ST30 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
VARS2Q5ST30 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
VARS2Q5ST30 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARS2Q5ST30 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
VARS2Q5ST30 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARS2Q5ST30 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.58■□□□□ 0.25
VARS2Q5ST30 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
VARS2Q5ST30 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
VARS2Q5ST30 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.58■□□□□ 0.24
VARS2Q5ST30 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms