Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AKR1C7P-201ENST00000305623 895 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 LAGE3P1-201ENST00000425356 484 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 KRT18P67-201ENST00000432816 1264 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AC008667.4-201ENST00000607370 168 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AL773604.1-201ENST00000617417 272 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AL031008.1-201ENST00000619963 541 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 AC006504.5-208ENST00000588784 2401 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
ANKRD55Q3KP44 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 KRT18P27-201ENST00000427733 1299 ntBASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
ANKRD55Q3KP44 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms