Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AC006453.1-201ENST00000636037 1257 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AL391256.1-201ENST00000443260 1855 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 LINC02012-201ENST00000608206 1725 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 AC011676.5-201ENST00000624864 2660 ntBASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
RSPO4Q2I0M5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
RSPO4Q2I0M5 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 DPM3-202ENST00000368399 517 ntBASIC15.08■□□□□ 0
RSPO4Q2I0M5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 RTN3P1-201ENST00000536295 711 ntBASIC15.08■□□□□ 0
RSPO4Q2I0M5 AC013355.1-201ENST00000562625 723 ntBASIC15.08■□□□□ 0
RSPO4Q2I0M5 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 DGAT2L7P-201ENST00000602462 744 ntBASIC15.08■□□□□ 0
RSPO4Q2I0M5 AP003392.6-201ENST00000607709 325 ntBASIC15.08■□□□□ 0
RSPO4Q2I0M5 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
RSPO4Q2I0M5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
RSPO4Q2I0M5 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 PCDHB17P-201ENST00000539533 2393 ntBASIC15.07■□□□□ 0
RSPO4Q2I0M5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 EID1-202ENST00000560490 584 ntTSL 3 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 AC106886.4-201ENST00000623557 2502 ntBASIC15.07■□□□□ 0
RSPO4Q2I0M5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
RSPO4Q2I0M5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC15.07■□□□□ 0
RSPO4Q2I0M5 NKILA-202ENST00000614771 2598 ntBASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms