Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN1BQ07699 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN1BQ07699 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.11□□□□□ -0.15
SCN1BQ07699 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
SCN1BQ07699 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SCN1BQ07699 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SCN1BQ07699 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SCN1BQ07699 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SCN1BQ07699 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.11□□□□□ -0.15
SCN1BQ07699 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.1□□□□□ -0.15
SCN1BQ07699 RDX-218ENST00000544551 4117 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SCN1BQ07699 RPS2P28-201ENST00000314255 741 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.1□□□□□ -0.15
SCN1BQ07699 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.1□□□□□ -0.15
SCN1BQ07699 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 AC105339.3-201ENST00000560043 636 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 AL356488.2-201ENST00000602755 427 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 AL121912.1-201ENST00000603683 238 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 TP73-AS1-207ENST00000624167 988 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 AC005593.1-201ENST00000624894 515 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 AP001350.2-201ENST00000625104 1094 ntBASIC14.1□□□□□ -0.15
SCN1BQ07699 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SCN1BQ07699 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SCN1BQ07699 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SCN1BQ07699 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SCN1BQ07699 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.09□□□□□ -0.15
SCN1BQ07699 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SCN1BQ07699 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SCN1BQ07699 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN1BQ07699 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SCN1BQ07699 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.09□□□□□ -0.15
SCN1BQ07699 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SCN1BQ07699 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SCN1BQ07699 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SCN1BQ07699 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.09□□□□□ -0.15
SCN1BQ07699 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.09□□□□□ -0.15
SCN1BQ07699 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN1BQ07699 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN1BQ07699 AC091167.2-201ENST00000579581 588 ntBASIC14.09□□□□□ -0.15
SCN1BQ07699 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.09□□□□□ -0.15
SCN1BQ07699 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.09□□□□□ -0.15
SCN1BQ07699 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.09□□□□□ -0.15
SCN1BQ07699 AC008735.5-201ENST00000623544 497 ntBASIC14.09□□□□□ -0.15
SCN1BQ07699 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 AL353732.1-201ENST00000569618 1459 ntBASIC14.09□□□□□ -0.15
SCN1BQ07699 AP002414.3-201ENST00000589352 1468 ntBASIC14.09□□□□□ -0.15
SCN1BQ07699 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SCN1BQ07699 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms