Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
HSPG2P98160 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HSPG2P98160 FLII-221ENST00000578558 2377 ntTSL 5 BASIC9.43□□□□□ -0.9
HSPG2P98160 AC092171.3-201ENST00000610122 2651 ntBASIC9.43□□□□□ -0.9
HSPG2P98160 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
HSPG2P98160 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
HSPG2P98160 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
HSPG2P98160 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
HSPG2P98160 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 AL583805.1-201ENST00000391389 531 ntBASIC9.42□□□□□ -0.9
HSPG2P98160 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 MIR6816-201ENST00000620368 66 ntBASIC9.42□□□□□ -0.9
HSPG2P98160 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 AC090502.4-201ENST00000551714 1386 ntBASIC9.42□□□□□ -0.9
HSPG2P98160 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 AMT-239ENST00000636865 1914 ntTSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 AC106047.2-201ENST00000511723 743 ntBASIC9.42□□□□□ -0.9
HSPG2P98160 AC138466.5-201ENST00000624002 808 ntBASIC9.42□□□□□ -0.9
HSPG2P98160 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 AC244394.1-201ENST00000435000 1665 ntBASIC9.42□□□□□ -0.9
HSPG2P98160 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
HSPG2P98160 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 TSPY25P-201ENST00000429463 745 ntBASIC9.42□□□□□ -0.9
HSPG2P98160 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
HSPG2P98160 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
HSPG2P98160 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
HSPG2P98160 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC9.42□□□□□ -0.9
HSPG2P98160 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC9.41□□□□□ -0.9
HSPG2P98160 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 REXO1L5P-201ENST00000622260 2098 ntBASIC9.41□□□□□ -0.9
HSPG2P98160 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC9.41□□□□□ -0.9
HSPG2P98160 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC9.41□□□□□ -0.9
HSPG2P98160 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 AC053503.3-201ENST00000448375 114 ntBASIC9.41□□□□□ -0.9
HSPG2P98160 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC9.41□□□□□ -0.9
HSPG2P98160 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 DUT-207ENST00000559416 635 ntTSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
HSPG2P98160 NUDT4P2-201ENST00000578341 546 ntBASIC9.41□□□□□ -0.9
HSPG2P98160 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
HSPG2P98160 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC9.41□□□□□ -0.9
HSPG2P98160 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
HSPG2P98160 AC023141.7-201ENST00000430646 407 ntBASIC9.41□□□□□ -0.9
HSPG2P98160 AC093826.1-201ENST00000508655 993 ntBASIC9.41□□□□□ -0.9
HSPG2P98160 HNRNPA1P36-201ENST00000521313 955 ntBASIC9.41□□□□□ -0.9
HSPG2P98160 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC9.41□□□□□ -0.9
HSPG2P98160 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC9.41□□□□□ -0.9
HSPG2P98160 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC9.41□□□□□ -0.9
HSPG2P98160 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC9.41□□□□□ -0.9
HSPG2P98160 AL136295.7-201ENST00000619226 1200 ntBASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms