Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.54■□□□□ 0.08
SRP54P61011 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SRP54P61011 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.54■□□□□ 0.08
SRP54P61011 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.54■□□□□ 0.08
SRP54P61011 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.54■□□□□ 0.08
SRP54P61011 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.54■□□□□ 0.08
SRP54P61011 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.54■□□□□ 0.08
SRP54P61011 AC097359.3-201ENST00000603982 1210 ntBASIC15.54■□□□□ 0.08
SRP54P61011 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.54■□□□□ 0.08
SRP54P61011 AL033527.5-201ENST00000641382 801 ntBASIC15.54■□□□□ 0.08
SRP54P61011 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
SRP54P61011 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 AC018892.3-201ENST00000623986 2499 ntBASIC15.54■□□□□ 0.08
SRP54P61011 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.54■□□□□ 0.08
SRP54P61011 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.54■□□□□ 0.08
SRP54P61011 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.54■□□□□ 0.08
SRP54P61011 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRP54P61011 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 AL607033.1-201ENST00000623900 1599 ntBASIC15.53■□□□□ 0.08
SRP54P61011 MTHFR-217ENST00000641820 1569 ntBASIC15.53■□□□□ 0.08
SRP54P61011 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SRP54P61011 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 AC011477.6-201ENST00000604980 1927 ntBASIC15.53■□□□□ 0.08
SRP54P61011 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SRP54P61011 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SRP54P61011 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 GPR53P-205ENST00000457298 1084 ntBASIC15.53■□□□□ 0.08
SRP54P61011 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 FAM86LP-201ENST00000478302 853 ntBASIC15.53■□□□□ 0.08
SRP54P61011 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.53■□□□□ 0.08
SRP54P61011 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.53■□□□□ 0.08
SRP54P61011 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.53■□□□□ 0.08
SRP54P61011 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.53■□□□□ 0.08
SRP54P61011 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
SRP54P61011 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRP54P61011 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 LINC02199-201ENST00000506655 2702 ntBASIC15.52■□□□□ 0.08
SRP54P61011 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRP54P61011 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.52■□□□□ 0.08
SRP54P61011 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRP54P61011 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.52■□□□□ 0.08
SRP54P61011 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRP54P61011 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
SRP54P61011 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.52■□□□□ 0.08
SRP54P61011 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms