Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDL3P58872 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.36■□□□□ 0.53
RHBDL3P58872 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDL3P58872 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDL3P58872 FAM86HP-204ENST00000513466 959 ntBASIC18.36■□□□□ 0.53
RHBDL3P58872 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDL3P58872 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC18.36■□□□□ 0.53
RHBDL3P58872 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDL3P58872 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDL3P58872 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC18.36■□□□□ 0.53
RHBDL3P58872 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDL3P58872 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC18.36■□□□□ 0.53
RHBDL3P58872 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RHBDL3P58872 RN7SL560P-201ENST00000577943 264 ntBASIC18.36■□□□□ 0.53
RHBDL3P58872 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC18.36■□□□□ 0.53
RHBDL3P58872 AL158070.2-201ENST00000623713 1621 ntBASIC18.36■□□□□ 0.53
RHBDL3P58872 AC006453.4-201ENST00000636949 1252 ntBASIC18.36■□□□□ 0.53
RHBDL3P58872 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
RHBDL3P58872 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RHBDL3P58872 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC18.35■□□□□ 0.53
RHBDL3P58872 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.35■□□□□ 0.53
RHBDL3P58872 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC18.35■□□□□ 0.53
RHBDL3P58872 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 AC099398.1-201ENST00000567919 2776 ntBASIC18.35■□□□□ 0.53
RHBDL3P58872 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 BRWD1P1-201ENST00000401091 371 ntBASIC18.35■□□□□ 0.53
RHBDL3P58872 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 MDH2-205ENST00000461263 648 ntTSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.35■□□□□ 0.53
RHBDL3P58872 AC004066.1-201ENST00000502488 802 ntBASIC18.35■□□□□ 0.53
RHBDL3P58872 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RHBDL3P58872 AC023310.1-201ENST00000554836 735 ntBASIC18.35■□□□□ 0.53
RHBDL3P58872 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.35■□□□□ 0.53
RHBDL3P58872 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.35■□□□□ 0.53
RHBDL3P58872 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC18.35■□□□□ 0.53
RHBDL3P58872 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.35■□□□□ 0.53
RHBDL3P58872 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RHBDL3P58872 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.35■□□□□ 0.53
RHBDL3P58872 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RHBDL3P58872 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
RHBDL3P58872 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RHBDL3P58872 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RHBDL3P58872 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.34■□□□□ 0.53
RHBDL3P58872 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RHBDL3P58872 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.34■□□□□ 0.53
RHBDL3P58872 OR6D1P-202ENST00000641007 5290 ntBASIC18.34■□□□□ 0.53
RHBDL3P58872 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RHBDL3P58872 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.34■□□□□ 0.53
RHBDL3P58872 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.34■□□□□ 0.53
RHBDL3P58872 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.34■□□□□ 0.53
RHBDL3P58872 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 AHCYP2-201ENST00000430630 1300 ntBASIC18.34■□□□□ 0.53
RHBDL3P58872 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RHBDL3P58872 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RHBDL3P58872 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
RHBDL3P58872 AL645937.2-201ENST00000396808 931 ntBASIC18.34■□□□□ 0.53
RHBDL3P58872 CD8B2-202ENST00000417670 633 ntBASIC18.34■□□□□ 0.53
RHBDL3P58872 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RHBDL3P58872 ZNF767P-206ENST00000513792 565 ntBASIC18.34■□□□□ 0.53
RHBDL3P58872 FAM8A2P-201ENST00000528813 1142 ntBASIC18.34■□□□□ 0.53
RHBDL3P58872 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.34■□□□□ 0.53
RHBDL3P58872 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.34■□□□□ 0.53
RHBDL3P58872 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC18.34■□□□□ 0.53
RHBDL3P58872 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms