Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL121723.1-201ENST00000445194 1519 ntBASIC15.06■□□□□ 0
CLDN6P56747 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.06■□□□□ 0
CLDN6P56747 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CLDN6P56747 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.06■□□□□ 0
CLDN6P56747 ALOX12P2-203ENST00000570921 1945 ntBASIC15.05■□□□□ 0
CLDN6P56747 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN6P56747 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.05■□□□□ 0
CLDN6P56747 REXO1L1P-202ENST00000608646 1974 ntBASIC15.05■□□□□ 0
CLDN6P56747 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN6P56747 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC15.05■□□□□ 0
CLDN6P56747 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.05■□□□□ 0
CLDN6P56747 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC15.05■□□□□ 0
CLDN6P56747 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
CLDN6P56747 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CLDN6P56747 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC15.05■□□□□ -0
CLDN6P56747 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.05■□□□□ -0
CLDN6P56747 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.05■□□□□ -0
CLDN6P56747 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.05■□□□□ -0
CLDN6P56747 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.05■□□□□ -0
CLDN6P56747 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 AC005695.3-201ENST00000614522 232 ntBASIC15.05■□□□□ -0
CLDN6P56747 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC15.05■□□□□ -0
CLDN6P56747 AC138951.2-201ENST00000623455 1161 ntBASIC15.05■□□□□ -0
CLDN6P56747 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.05■□□□□ -0
CLDN6P56747 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
CLDN6P56747 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.05■□□□□ -0
CLDN6P56747 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.05■□□□□ -0
CLDN6P56747 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.05■□□□□ -0
CLDN6P56747 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLDN6P56747 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 MIR663B-201ENST00000408361 115 ntBASIC15.04■□□□□ -0
CLDN6P56747 CNN2P8-201ENST00000421872 913 ntBASIC15.04■□□□□ -0
CLDN6P56747 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 CALR4P-201ENST00000431943 946 ntBASIC15.04■□□□□ -0
CLDN6P56747 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.04■□□□□ -0
CLDN6P56747 Z93015.1-201ENST00000451718 390 ntBASIC15.04■□□□□ -0
CLDN6P56747 PHKG1P2-201ENST00000457537 863 ntBASIC15.04■□□□□ -0
CLDN6P56747 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 AC022137.2-201ENST00000503482 481 ntBASIC15.04■□□□□ -0
CLDN6P56747 AC079328.1-201ENST00000560358 952 ntBASIC15.04■□□□□ -0
CLDN6P56747 AC025279.2-201ENST00000569730 653 ntBASIC15.04■□□□□ -0
CLDN6P56747 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 AC107373.2-201ENST00000607735 490 ntBASIC15.04■□□□□ -0
CLDN6P56747 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC15.04■□□□□ -0
CLDN6P56747 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.04■□□□□ -0
CLDN6P56747 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
CLDN6P56747 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
CLDN6P56747 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC15.03■□□□□ -0
CLDN6P56747 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
CLDN6P56747 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.03■□□□□ -0
CLDN6P56747 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms