Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 METTL26-204ENST00000397665 558 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 GAPDHP40-201ENST00000505218 1006 ntBASIC17.13■□□□□ 0.33
NCKAP1LP55160 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 WASH4P-201ENST00000564273 1246 ntBASIC17.13■□□□□ 0.33
NCKAP1LP55160 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 GSN-206ENST00000394353 2311 ntTSL 2 BASIC17.13■□□□□ 0.33
NCKAP1LP55160 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
NCKAP1LP55160 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 AMT-232ENST00000636199 1546 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 AC112693.3-201ENST00000624819 1983 ntBASIC17.12■□□□□ 0.33
NCKAP1LP55160 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 MYCLP2-201ENST00000449268 967 ntBASIC17.12■□□□□ 0.33
NCKAP1LP55160 ELK1P1-201ENST00000485699 580 ntBASIC17.12■□□□□ 0.33
NCKAP1LP55160 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 AL049840.4-201ENST00000602422 811 ntBASIC17.12■□□□□ 0.33
NCKAP1LP55160 TMEM261P1-201ENST00000604899 340 ntBASIC17.12■□□□□ 0.33
NCKAP1LP55160 AC008494.3-201ENST00000606615 944 ntBASIC17.12■□□□□ 0.33
NCKAP1LP55160 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
NCKAP1LP55160 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
NCKAP1LP55160 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 AC092552.1-201ENST00000547243 906 ntBASIC17.11■□□□□ 0.33
NCKAP1LP55160 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.11■□□□□ 0.33
NCKAP1LP55160 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NCKAP1LP55160 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms