Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN5P54829 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN5P54829 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
PTPN5P54829 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
PTPN5P54829 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN5P54829 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN5P54829 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN5P54829 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTPN5P54829 AC004898.1-201ENST00000451057 766 ntBASIC16.24■□□□□ 0.19
PTPN5P54829 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 BX284668.4-201ENST00000453917 508 ntBASIC16.24■□□□□ 0.19
PTPN5P54829 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.24■□□□□ 0.19
PTPN5P54829 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC16.24■□□□□ 0.19
PTPN5P54829 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN5P54829 AC023310.1-201ENST00000554836 735 ntBASIC16.24■□□□□ 0.19
PTPN5P54829 USP3-AS1-204ENST00000559861 620 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN5P54829 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN5P54829 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.24■□□□□ 0.19
PTPN5P54829 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN5P54829 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN5P54829 HADH-212ENST00000638621 741 ntTSL 5 BASIC16.24■□□□□ 0.19
PTPN5P54829 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
PTPN5P54829 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.24■□□□□ 0.19
PTPN5P54829 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
PTPN5P54829 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PTPN5P54829 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PTPN5P54829 AL391005.1-201ENST00000623953 2435 ntBASIC16.24■□□□□ 0.19
PTPN5P54829 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 PCDHB19P-201ENST00000570871 2371 ntBASIC16.23■□□□□ 0.19
PTPN5P54829 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN5P54829 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PTPN5P54829 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTPN5P54829 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PTPN5P54829 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PTPN5P54829 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PTPN5P54829 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.23■□□□□ 0.19
PTPN5P54829 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
PTPN5P54829 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 AC114501.1-201ENST00000445949 172 ntBASIC16.23■□□□□ 0.19
PTPN5P54829 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC16.23■□□□□ 0.19
PTPN5P54829 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.23■□□□□ 0.19
PTPN5P54829 MIR3619-201ENST00000579667 83 ntBASIC16.23■□□□□ 0.19
PTPN5P54829 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.23■□□□□ 0.19
PTPN5P54829 AL391001.1-201ENST00000602747 715 ntBASIC16.23■□□□□ 0.19
PTPN5P54829 AC138627.1-207ENST00000641560 1006 ntBASIC16.23■□□□□ 0.19
PTPN5P54829 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 AL596087.1-201ENST00000400979 1969 ntBASIC16.23■□□□□ 0.19
PTPN5P54829 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
PTPN5P54829 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
PTPN5P54829 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.23■□□□□ 0.19
PTPN5P54829 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PTPN5P54829 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
PTPN5P54829 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN5P54829 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN5P54829 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN5P54829 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN5P54829 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN5P54829 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PTPN5P54829 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms